Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deazaflavin-dependent oxidoreductase, nitroreductase family | SAMN05216266_10196 | Not Available | Negative | 107167 - 107622 | 17239.7 |
| transcriptional regulator, tetr family | SAMN05216266_10197 | Not Available | Positive | 107742 - 108470 | 26207.1 |
| bile acid:na+ symporter, bass family | SAMN05216266_10198 | Not Available | Positive | 108458 - 109378 | 31395.5 |
| dna-binding transcriptional regulator, marr family | SAMN05216266_10199 | Not Available | Positive | 109415 - 109870 | 16915.2 |
| osmotically inducible protein osmc | SAMN05216266_101100 | Not Available | Positive | 109872 - 110303 | 14681.1 |
| peptidoglycan-binding (pgrp) domain of peptidoglycan hydrolases-containing protein | SAMN05216266_101101 | Not Available | Negative | 110361 - 111497 | 38753.5 |
| peptidoglycan-binding (pgrp) domain of peptidoglycan hydrolases-containing protein | SAMN05216266_101102 | Not Available | Negative | 111517 - 112566 | 37160.7 |
| dna-binding transcriptional activator of the sarp family | SAMN05216266_101103 | Not Available | Negative | 112718 - 115726 | 107792.0 |
| transcriptional regulator, contains xre-family hth domain | SAMN05216266_101104 | Not Available | Positive | 116131 - 116592 | 17067.1 |
| protein of unknown function | SAMN05216266_101105 | Not Available | Positive | 116675 - 117232 | 21258.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
