Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maleate isomerase | SAMN05216266_102224 | Not Available | Positive | 1072811 - 1073560 | 27169.7 |
| maleate cis-trans isomerase | SAMN05216266_102225 | Not Available | Positive | 1073634 - 1074374 | 25570.4 |
| dna-binding transcriptional regulator, gntr family | SAMN05216266_102226 | Not Available | Positive | 1074376 - 1075050 | 24743.6 |
| tartrate dehydrogenase/decarboxylase / d-malate dehydrogenase | SAMN05216266_102227 | Not Available | Negative | 1075136 - 1076203 | 37688.7 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN05216266_102228 | Not Available | Negative | 1076200 - 1077663 | 51033.2 |
| 4-aminobutyrate aminotransferase | SAMN05216266_102229 | Not Available | Positive | 1077761 - 1079017 | 43816.2 |
| protein of unknown function | SAMN05216266_102230 | Not Available | Positive | 1079030 - 1079530 | 18075.0 |
| hypothetical protein | SAMN05216266_102231 | Not Available | Positive | 1079950 - 1080042 | 3271.96 |
| predicted oxidoreductase | SAMN05216266_102232 | Not Available | Negative | 1080107 - 1080946 | 30184.0 |
| glycolate oxidase | SAMN05216266_102233 | Not Available | Positive | 1081106 - 1082491 | 48204.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
