Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginyl-trna synthetase | SAMN05216266_102194 | Not Available | Negative | 1043668 - 1045479 | 65316.5 |
| protein of unknown function | SAMN05216266_102195 | Not Available | Positive | 1045500 - 1046345 | 29909.9 |
| uncharacterized conserved protein, duf305 family | SAMN05216266_102196 | Not Available | Positive | 1046349 - 1047083 | 26597.8 |
| cobalt-zinc-cadmium efflux system protein | SAMN05216266_102197 | Not Available | Negative | 1047119 - 1048039 | 32363.5 |
| Trna-arg | Not Available | Not Available | Positive | 1048277 - 1048349 | Not Available |
| hypothetical protein | SAMN05216266_102199 | Not Available | Negative | 1048936 - 1049247 | 11724.0 |
| alkaline phosphatase d | SAMN05216266_102200 | Not Available | Negative | 1049738 - 1051288 | 56647.6 |
| sh3 domain-containing protein | SAMN05216266_102201 | Not Available | Negative | 1051348 - 1051905 | 18894.7 |
| hypothetical protein | SAMN05216266_102202 | Not Available | Negative | 1052126 - 1052701 | 21243.3 |
| transcriptional regulator, tetr family | SAMN05216266_102203 | Not Available | Positive | 1052789 - 1053379 | 21537.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
