Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | SAMN05216266_102184 | Not Available | Negative | 1032310 - 1032960 | 22163.5 |
| release factor glutamine methyltransferase | SAMN05216266_102185 | Not Available | Negative | 1032988 - 1033851 | 30658.1 |
| peptide chain release factor 1 | SAMN05216266_102186 | Not Available | Negative | 1033963 - 1035036 | 39424.9 |
| large subunit ribosomal protein l31 | SAMN05216266_102187 | Not Available | Negative | 1035138 - 1035365 | 8344.95 |
| hypothetical protein | SAMN05216266_102188 | Not Available | Positive | 1035624 - 1036169 | 18374.5 |
| transcription termination factor rho | SAMN05216266_102189 | Not Available | Negative | 1036308 - 1038338 | 73070.3 |
| homoserine kinase | SAMN05216266_102190 | Not Available | Negative | 1038730 - 1039620 | 30347.3 |
| threonine synthase | SAMN05216266_102191 | Not Available | Negative | 1039769 - 1040833 | 35948.9 |
| homoserine dehydrogenase | SAMN05216266_102192 | Not Available | Negative | 1040841 - 1042148 | 45231.0 |
| diaminopimelate decarboxylase | SAMN05216266_102193 | Not Available | Negative | 1042220 - 1043659 | 51610.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
