Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter membrane protein 1, paat family | SAMN05216266_102164 | Not Available | Negative | 1012678 - 1013379 | 25767.5 |
| polar amino acid transport system substrate-binding protein | SAMN05216266_102165 | Not Available | Negative | 1013410 - 1014282 | 30695.2 |
| enoyl-coa hydratase/carnithine racemase | SAMN05216266_102166 | Not Available | Negative | 1014551 - 1015369 | 28999.8 |
| (r)-ethylmalonyl-coa mutase | SAMN05216266_102167 | Not Available | Negative | 1015388 - 1017412 | 73311.3 |
| resistance to homoserine/threonine (rhtb) family protein | SAMN05216266_102168 | Not Available | Positive | 1017564 - 1018190 | 22484.9 |
| trypsin | SAMN05216266_102169 | Not Available | Positive | 1018256 - 1019179 | 31984.0 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN05216266_102170 | Not Available | Negative | 1019219 - 1020493 | 45001.0 |
| glycosyl hydrolase family 26 | SAMN05216266_102171 | Not Available | Positive | 1020769 - 1021668 | 33359.0 |
| cob(i)alamin adenosyltransferase | SAMN05216266_102172 | Not Available | Positive | 1021697 - 1022269 | 20637.6 |
| protein of unknown function | SAMN05216266_102173 | Not Available | Negative | 1022310 - 1022744 | 16190.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
