Amycolatopsis marina

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis marina is a Gram-positive bacterium that demonstrates aerobic metabolism and thrives optimally at a temperature of 29.0°C. This microbial species belongs to the genus Amycolatopsis, which is known for its ability to produce various bioactive compounds. As a member of the Actinobacteria phylum, A. marina exhibits the characteristic high G+C content in its DNA, which is a hallmark of many actinobacteria and is often associated with their complex secondary metabolite production. The aerobic nature of A. marina indicates that it relies on oxygen for its growth and metabolic processes, which may influence its ecological niches and interactions with other microorganisms in its environment. Given its optimal growth temperature, A. marina may be well-suited to marine or estuarine environments where temperatures are moderate and the presence of oxygen is abundant. Furthermore, the ability of A. marina to thrive in oxygen-rich conditions suggests potential roles in biogeochemical cycles, particularly in nutrient cycling within aquatic ecosystems. The ecological implications of its metabolic activities could contribute to the breakdown of organic matter or the production of compounds that influence microbial community dynamics in marine habitats, highlighting the importance of this bacterium in maintaining ecological balance.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis marina
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis marina strain CGMCC 4.3568 genome assembly, contig:

Gene Summary

Adenine Count

1120190 bp

Thymine Count

1110911 bp

Guanine Count

2383839 bp

Cytosine Count

2405654 bp

Genome Length

7020699 bp

Protein-coding Genes

6665 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydroxyacetone kinase dhal subunitSAMN05216266_102154Not AvailableNegative1003641 - 100426420838.5
dihydroxyacetone kinase dhak subunitSAMN05216266_102155Not AvailableNegative1004266 - 100526734821.7
protein of unknown functionSAMN05216266_102156Not AvailableNegative1005353 - 100638735500.9
hypothetical proteinSAMN05216266_102157Not AvailableNegative1006384 - 10066629863.06
solute:na+ symporter, sss familySAMN05216266_102158Not AvailableNegative1006675 - 100837260482.5
gntr family transcriptional regulatorSAMN05216266_102159Not AvailableNegative1008663 - 100942427570.7
hypothetical proteinSAMN05216266_102160Not AvailableNegative1009845 - 101050424531.5
nudix domain-containing proteinSAMN05216266_102161Not AvailablePositive1010603 - 101113920078.7
amino acid abc transporter atp-binding protein, paat familySAMN05216266_102162Not AvailableNegative1011214 - 101202330572.1
amino acid abc transporter membrane protein 2, paat familySAMN05216266_102163Not AvailableNegative1012025 - 101268124301.3

Displaying genes 1001 – 1010 of 1830 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.