Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| whib family transcriptional regulator, redox-sensing transcriptional regulator | SAMN05216266_102144 | Not Available | Negative | 994209 - 994502 | 11231.3 |
| nadh dehydrogenase | SAMN05216266_102145 | Not Available | Negative | 994632 - 995981 | 48312.0 |
| hypothetical protein | SAMN05216266_102146 | Not Available | Negative | 995988 - 996164 | 6504.18 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05216266_102147 | Not Available | Negative | 996194 - 996961 | 27782.4 |
| protein n-acetyltransferase, rimj/riml family | SAMN05216266_102148 | Not Available | Positive | 996992 - 997504 | 19353.8 |
| grpb domain, predicted nucleotidyltransferase, upf0157 family | SAMN05216266_102149 | Not Available | Negative | 997897 - 998448 | 21290.2 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN05216266_102150 | Not Available | Negative | 998492 - 999676 | 40554.4 |
| 3-hydroxybutyryl-coa dehydrogenase | SAMN05216266_102151 | Not Available | Negative | 999977 - 1001779 | 63827.1 |
| hypothetical protein | SAMN05216266_102152 | Not Available | Negative | 1001888 - 1002850 | 34281.1 |
| phosphocarrier protein hpr /dihydroxyacetone kinase dham subunit | SAMN05216266_102153 | Not Available | Negative | 1002853 - 1003530 | 22790.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
