Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1120190 bp
Thymine Count
1110911 bp
Guanine Count
2383839 bp
Cytosine Count
2405654 bp
Genome Length
7020699 bp
Protein-coding Genes
6665 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN05216266_10186 | Not Available | Negative | 98397 - 99272 | 31729.9 |
| zinc-finger | SAMN05216266_10187 | Not Available | Positive | 99364 - 99555 | 7058.26 |
| hypothetical protein | SAMN05216266_10188 | Not Available | Positive | 99516 - 99833 | 11426.8 |
| hnh endonuclease | SAMN05216266_10189 | Not Available | Positive | 99915 - 101198 | 46899.6 |
| probable f420-dependent oxidoreductase, rv3520c family | SAMN05216266_10190 | Not Available | Negative | 101077 - 102117 | 38013.9 |
| hypothetical protein | SAMN05216266_10191 | Not Available | Negative | 102188 - 102691 | 17314.3 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN05216266_10192 | Not Available | Positive | 102775 - 104226 | 51469.3 |
| choline/carnitine/betaine transport | SAMN05216266_10193 | Not Available | Negative | 104233 - 105792 | 55691.6 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05216266_10194 | Not Available | Negative | 105797 - 106777 | 34635.3 |
| hypothetical protein | SAMN05216266_10195 | Not Available | Positive | 106923 - 107114 | 6523.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
