Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Nevskiales
Family
Nevskiaceae
Genus
Hydrocarboniphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Nevskiales |
| Family | Nevskiaceae |
| Genus | Hydrocarboniphaga |
| Species | Hydrocarboniphaga daqingensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
651164 bp
Thymine Count
664854 bp
Guanine Count
1244492 bp
Cytosine Count
1235012 bp
Genome Length
3800678 bp
Protein-coding Genes
3256 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease e | SAMN04488068_0538 | Not Available | Positive | 518889 - 522086 | 113942.0 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN04488068_0539 | Not Available | Negative | 522151 - 522924 | 28249.9 |
| hypothetical protein | SAMN04488068_0540 | Not Available | Negative | 522924 - 523103 | 6886.39 |
| lipid-a-disaccharide kinase | SAMN04488068_0541 | Not Available | Negative | 523123 - 524136 | 36556.4 |
| atp-binding cassette, subfamily b, msba | SAMN04488068_0542 | Not Available | Negative | 524149 - 525888 | 63831.7 |
| hupe / urej protein | SAMN04488068_0543 | Not Available | Negative | 526004 - 527209 | 43883.8 |
| adenine deaminase | SAMN04488068_0544 | Not Available | Negative | 527214 - 529145 | 69711.9 |
| 5-methylthioadenosine/s-adenosylhomocysteine deaminase | SAMN04488068_0545 | Not Available | Negative | 529206 - 530603 | 51237.3 |
| uncharacterized conserved protein, duf1499 family | SAMN04488068_0546 | Not Available | Negative | 530700 - 531152 | 16669.1 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN04488068_0547 | Not Available | Negative | 531160 - 532083 | 33231.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
