Hydrocarboniphaga daqingensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Nevskiales

Family

Nevskiaceae

Genus

Hydrocarboniphaga

Description

Hydrocarboniphaga daqingensis is a Gram-negative, rod-shaped bacterium characterized by its aerobic metabolism and non-spore-forming nature. This microbe thrives optimally at a temperature of 25.0°C, suggesting a preference for moderate environmental conditions. Its Gram-negative cell wall structure indicates the presence of an outer membrane, which may confer specific advantages in its ecological niche, such as resistance to certain antibiotics or environmental stresses. As an aerobic organism, Hydrocarboniphaga daqingensis requires oxygen for growth and energy production, positioning it as a potential player in biogeochemical cycles, particularly in environments enriched with hydrocarbons. This trait may enable it to contribute to the degradation of hydrocarbon pollutants, making it of interest for bioremediation applications. The ecological role of Hydrocarboniphaga daqingensis could be significant in environments such as oil-contaminated sites, where its metabolic capabilities might facilitate the breakdown of complex hydrocarbon compounds, thereby aiding in the restoration of affected ecosystems. Further investigation into its metabolic pathways and interactions with other microbial communities could reveal additional insights into its functional contributions within such biogeochemical contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderNevskiales
FamilyNevskiaceae
GenusHydrocarboniphaga
SpeciesHydrocarboniphaga daqingensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrocarboniphaga daqingensis strain CGMCC 1.7049 genome assembly,

Gene Summary

Adenine Count

651164 bp

Thymine Count

664854 bp

Guanine Count

1244492 bp

Cytosine Count

1235012 bp

Genome Length

3800678 bp

Protein-coding Genes

3256 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ornithine carbamoyltransferaseSAMN04488068_3128Not AvailableNegative3473845 - 347474132296.6
superoxide dismutase, fe-mn familySAMN04488068_3129Not AvailableNegative3474883 - 347545821435.2
monothiol glutaredoxinSAMN04488068_3130Not AvailablePositive3475731 - 347605712160.6
isocitrate dehydrogenase (nadp)SAMN04488068_3131Not AvailablePositive3476224 - 347802365528.8
molybdenum cofactor synthesis domain-containing proteinSAMN04488068_3132Not AvailablePositive3478103 - 347886427376.8
phosphoglucomutaseSAMN04488068_3133Not AvailableNegative3478871 - 348050258572.5
hypothetical proteinSAMN04488068_3134Not AvailablePositive3480615 - 348113619838.4
phosphomannomutaseSAMN04488068_3135Not AvailableNegative3481159 - 348251449143.0
carbonic anhydrase or acetyltransferase, isoleucine patch superfamilySAMN04488068_3136Not AvailablePositive3482635 - 348315318436.5
phosphohistidine phosphataseSAMN04488068_3137Not AvailableNegative3483214 - 348371418640.1

Displaying genes 3031 – 3040 of 3310 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.