Hydrocarboniphaga daqingensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Nevskiales

Family

Nevskiaceae

Genus

Hydrocarboniphaga

Description

Hydrocarboniphaga daqingensis is a Gram-negative, rod-shaped bacterium characterized by its aerobic metabolism and non-spore-forming nature. This microbe thrives optimally at a temperature of 25.0°C, suggesting a preference for moderate environmental conditions. Its Gram-negative cell wall structure indicates the presence of an outer membrane, which may confer specific advantages in its ecological niche, such as resistance to certain antibiotics or environmental stresses. As an aerobic organism, Hydrocarboniphaga daqingensis requires oxygen for growth and energy production, positioning it as a potential player in biogeochemical cycles, particularly in environments enriched with hydrocarbons. This trait may enable it to contribute to the degradation of hydrocarbon pollutants, making it of interest for bioremediation applications. The ecological role of Hydrocarboniphaga daqingensis could be significant in environments such as oil-contaminated sites, where its metabolic capabilities might facilitate the breakdown of complex hydrocarbon compounds, thereby aiding in the restoration of affected ecosystems. Further investigation into its metabolic pathways and interactions with other microbial communities could reveal additional insights into its functional contributions within such biogeochemical contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderNevskiales
FamilyNevskiaceae
GenusHydrocarboniphaga
SpeciesHydrocarboniphaga daqingensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrocarboniphaga daqingensis strain CGMCC 1.7049 genome assembly,

Gene Summary

Adenine Count

651164 bp

Thymine Count

664854 bp

Guanine Count

1244492 bp

Cytosine Count

1235012 bp

Genome Length

3800678 bp

Protein-coding Genes

3256 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleoside diphosphate kinaseSAMN04488068_2669Not AvailableNegative2938902 - 293933315634.6
phosphatidylglycerol:prolipoprotein diacylglycerol transferaseSAMN04488068_2670Not AvailableNegative2939484 - 294029630036.5
23s rrna (cytosine1962-c5)-methyltransferaseSAMN04488068_2671Not AvailableNegative2940385 - 294155743185.2
adenosine kinaseSAMN04488068_2672Not AvailableNegative2941721 - 294274937185.6
hypothetical proteinSAMN04488068_2673Not AvailablePositive2942949 - 294331412683.2
protein of unknown functionSAMN04488068_2674Not AvailablePositive2943314 - 294515266989.9
glucose-6-phosphate 1-dehydrogenaseSAMN04488068_2675Not AvailableNegative2945172 - 294662953634.6
glycine dehydrogenase subunit 2SAMN04488068_2676Not AvailableNegative2946686 - 294814653284.4
glycine dehydrogenase subunit 1SAMN04488068_2677Not AvailableNegative2948157 - 294953948865.7
glycine cleavage system h proteinSAMN04488068_2678Not AvailableNegative2949625 - 295001413476.0

Displaying genes 2581 – 2590 of 3310 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.