Hydrocarboniphaga daqingensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Nevskiales

Family

Nevskiaceae

Genus

Hydrocarboniphaga

Description

Hydrocarboniphaga daqingensis is a Gram-negative, rod-shaped bacterium characterized by its aerobic metabolism and non-spore-forming nature. This microbe thrives optimally at a temperature of 25.0°C, suggesting a preference for moderate environmental conditions. Its Gram-negative cell wall structure indicates the presence of an outer membrane, which may confer specific advantages in its ecological niche, such as resistance to certain antibiotics or environmental stresses. As an aerobic organism, Hydrocarboniphaga daqingensis requires oxygen for growth and energy production, positioning it as a potential player in biogeochemical cycles, particularly in environments enriched with hydrocarbons. This trait may enable it to contribute to the degradation of hydrocarbon pollutants, making it of interest for bioremediation applications. The ecological role of Hydrocarboniphaga daqingensis could be significant in environments such as oil-contaminated sites, where its metabolic capabilities might facilitate the breakdown of complex hydrocarbon compounds, thereby aiding in the restoration of affected ecosystems. Further investigation into its metabolic pathways and interactions with other microbial communities could reveal additional insights into its functional contributions within such biogeochemical contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderNevskiales
FamilyNevskiaceae
GenusHydrocarboniphaga
SpeciesHydrocarboniphaga daqingensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrocarboniphaga daqingensis strain CGMCC 1.7049 genome assembly,

Gene Summary

Adenine Count

651164 bp

Thymine Count

664854 bp

Guanine Count

1244492 bp

Cytosine Count

1235012 bp

Genome Length

3800678 bp

Protein-coding Genes

3256 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c oxidase cbb3-type subunit 1SAMN04488068_2216Not AvailableNegative2421774 - 242322853887.6
oxygen-independent coproporphyrinogen-3 oxidaseSAMN04488068_2217Not AvailablePositive2423356 - 242474151106.1
two-component system, luxr family, sensor kinase fixlSAMN04488068_2218Not AvailablePositive2424774 - 242602145972.1
two-component response regulator, fixj family, consists of rec and hth domainsSAMN04488068_2219Not AvailablePositive2426021 - 242664122894.7
response regulator receiver domain-containing proteinSAMN04488068_2220Not AvailablePositive2426685 - 242708914380.5
crp/fnr family transcriptional regulator, anaerobic regulatory proteinSAMN04488068_2221Not AvailablePositive2427179 - 242786825204.9
universal stress protein eSAMN04488068_2222Not AvailablePositive2427959 - 242886733291.1
two-component system, ntrc family, response regulator atocSAMN04488068_2223Not AvailableNegative2428901 - 243029852135.9
signal transduction histidine kinase regulating c4-dicarboxylate transport systemSAMN04488068_2224Not AvailableNegative2430295 - 243204663731.2
hypothetical proteinSAMN04488068_2225Not AvailablePositive2432170 - 243324939891.7

Displaying genes 2131 – 2140 of 3310 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.