Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Nevskiales
Family
Nevskiaceae
Genus
Hydrocarboniphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Nevskiales |
| Family | Nevskiaceae |
| Genus | Hydrocarboniphaga |
| Species | Hydrocarboniphaga daqingensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
651164 bp
Thymine Count
664854 bp
Guanine Count
1244492 bp
Cytosine Count
1235012 bp
Genome Length
3800678 bp
Protein-coding Genes
3256 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein cpab | SAMN04488068_1853 | Not Available | Positive | 1984701 - 1985660 | 33596.4 |
| pilus assembly protein cpac | SAMN04488068_1854 | Not Available | Positive | 1985736 - 1987139 | 49123.0 |
| pilus assembly protein cpae | SAMN04488068_1855 | Not Available | Positive | 1987203 - 1988399 | 43294.6 |
| pilus assembly protein cpaf | SAMN04488068_1856 | Not Available | Positive | 1988423 - 1989643 | 45414.5 |
| tight adherence protein b | SAMN04488068_1857 | Not Available | Positive | 1989640 - 1990560 | 33647.1 |
| tight adherence protein c | SAMN04488068_1858 | Not Available | Positive | 1990557 - 1991498 | 34303.8 |
| hypothetical protein | SAMN04488068_1859 | Not Available | Positive | 1991456 - 1992226 | 28230.0 |
| protein of unknown function | SAMN04488068_1860 | Not Available | Positive | 1992243 - 1992545 | 10581.5 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN04488068_1861 | Not Available | Positive | 1992620 - 1995775 | 115771.0 |
| hypothetical protein | SAMN04488068_1862 | Not Available | Positive | 1996259 - 1996609 | 10815.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
