Hydrocarboniphaga daqingensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Nevskiales

Family

Nevskiaceae

Genus

Hydrocarboniphaga

Description

Hydrocarboniphaga daqingensis is a Gram-negative, rod-shaped bacterium characterized by its aerobic metabolism and non-spore-forming nature. This microbe thrives optimally at a temperature of 25.0°C, suggesting a preference for moderate environmental conditions. Its Gram-negative cell wall structure indicates the presence of an outer membrane, which may confer specific advantages in its ecological niche, such as resistance to certain antibiotics or environmental stresses. As an aerobic organism, Hydrocarboniphaga daqingensis requires oxygen for growth and energy production, positioning it as a potential player in biogeochemical cycles, particularly in environments enriched with hydrocarbons. This trait may enable it to contribute to the degradation of hydrocarbon pollutants, making it of interest for bioremediation applications. The ecological role of Hydrocarboniphaga daqingensis could be significant in environments such as oil-contaminated sites, where its metabolic capabilities might facilitate the breakdown of complex hydrocarbon compounds, thereby aiding in the restoration of affected ecosystems. Further investigation into its metabolic pathways and interactions with other microbial communities could reveal additional insights into its functional contributions within such biogeochemical contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderNevskiales
FamilyNevskiaceae
GenusHydrocarboniphaga
SpeciesHydrocarboniphaga daqingensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrocarboniphaga daqingensis strain CGMCC 1.7049 genome assembly,

Gene Summary

Adenine Count

651164 bp

Thymine Count

664854 bp

Guanine Count

1244492 bp

Cytosine Count

1235012 bp

Genome Length

3800678 bp

Protein-coding Genes

3256 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diguanylate cyclase (ggdef) domain-containing proteinSAMN04488068_1781Not AvailableNegative1904353 - 190650079957.8
2,4-dienoyl-coa reductaseSAMN04488068_1782Not AvailableNegative1906615 - 190786245189.6
trap-type uncharacterized transport system, substrate-binding proteinSAMN04488068_1783Not AvailableNegative1907909 - 190934252545.6
rnd family efflux transporter, mfp subunitSAMN04488068_1784Not AvailablePositive1909666 - 191082941525.6
hydrophobic/amphiphilic exporter-1, hae1 familySAMN04488068_1785Not AvailablePositive1910862 - 1913933109557.0
beta-lactamase class aSAMN04488068_1786Not AvailableNegative1913955 - 191487832548.2
hypothetical proteinSAMN04488068_1787Not AvailablePositive1914957 - 191522310226.7
hypothetical proteinSAMN04488068_1788Not AvailablePositive1915321 - 191604626443.0
sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamilySAMN04488068_1789Not AvailablePositive1916043 - 191684329632.8
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (e3) componentSAMN04488068_1790Not AvailablePositive1916840 - 191899078262.8

Displaying genes 1701 – 1710 of 3310 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.