Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Nevskiales
Family
Nevskiaceae
Genus
Hydrocarboniphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Nevskiales |
| Family | Nevskiaceae |
| Genus | Hydrocarboniphaga |
| Species | Hydrocarboniphaga daqingensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
651164 bp
Thymine Count
664854 bp
Guanine Count
1244492 bp
Cytosine Count
1235012 bp
Genome Length
3800678 bp
Protein-coding Genes
3256 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | SAMN04488068_1074 | Not Available | Positive | 1127705 - 1129294 | 56760.6 |
| acylphosphatase | SAMN04488068_1075 | Not Available | Negative | 1129308 - 1129598 | 10622.6 |
| hypothetical protein | SAMN04488068_1076 | Not Available | Positive | 1129626 - 1130300 | 24447.1 |
| hypothetical protein | SAMN04488068_1077 | Not Available | Negative | 1130313 - 1131260 | 35747.8 |
| putative peptidoglycan binding domain-containing protein | SAMN04488068_1078 | Not Available | Negative | 1131257 - 1132240 | 36511.5 |
| predicted arabinose efflux permease, mfs family | SAMN04488068_1079 | Not Available | Negative | 1132354 - 1133604 | 44238.1 |
| ompa-ompf porin, oop family | SAMN04488068_1080 | Not Available | Negative | 1133707 - 1134990 | 44735.8 |
| peptide chain release factor 3 | SAMN04488068_1081 | Not Available | Negative | 1135189 - 1136775 | 59198.9 |
| wd40 repeat | SAMN04488068_1082 | Not Available | Positive | 1136906 - 1140643 | 133290.0 |
| hypothetical protein | SAMN04488068_1083 | Not Available | Negative | 1140644 - 1141390 | 26973.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
