Desulfohalobium retbaense DSM 5692

Gram-negativeBacilliNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfohalobiaceae

Genus

Desulfohalobium

Description

Desulfohalobium retbaense (strain DSM 5692) is an anaerobic, moderately halophilic sulfate-reducing Gram-negative bacterium isolated from sediment of the pink hypersaline Lake Retba in Senegal, Africa. This organism incompletely oxidizes ethanol, pyruvate, and lactate to acetate and CO(2). Sulfate, sulfite, thiosulfate, and elemental sulfur are used as electron acceptors and reduced to H2S. Growth occurs at pH values ranging from 5.5 to 8.0, with an optimum pH between 6.5-7.0. The optimum temperature for growth is between 37 to 4O degrees Celsius, and 45 degrees Celsius is the upper temperature limit for growth. NaCl and MgCl(2), are required for growth, with an optimum NaCl concentration near 10%. (Adaptated from: http://ijs.sgmjournals.org/cgi/reprint/41/1/74.pdf). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfohalobiaceae
GenusDesulfohalobium
SpeciesDesulfohalobium retbaense
StrainDSM 5692

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Desulfohalobium retbaense DSM 5692
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature37
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Desulfohalobium retbaense DSM 5692, complete sequence.

Gene Summary

Adenine Count

609005 bp

Thymine Count

607177 bp

Guanine Count

823732 bp

Cytosine Count

824390 bp

Genome Length

2864304 bp

Protein-coding Genes

2437 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family nad(p)-dependent oxidoreductaseDRET_RS10570Not AvailablePositive2403693 - 240444226337.7
atp-dependent 6-phosphofructokinaseDRET_RS10575Not AvailablePositive2404468 - 240578147437.0
hypothetical proteinDRET_RS10580Not AvailableNegative2405994 - 240643416683.5
tetratricopeptide repeat proteinDRET_RS10585Not AvailableNegative2406624 - 240715720685.2
mfs transporterDRET_RS10590Not AvailablePositive2407308 - 240848341651.4
sulfite exporter taue/safe family proteinDRET_RS10595Not AvailablePositive2408742 - 240971634298.4
duf1634 domain-containing proteinDRET_RS10600Not AvailablePositive2409733 - 241015515284.9
tigr04282 family arsenosugar biosynthesis glycosyltransferaseDRET_RS13465Not AvailablePositive2410275 - 241198163277.3
abc transporter atp-binding proteinDRET_RS10610Not AvailablePositive2411966 - 241291635004.3
abc transporter substrate-binding proteinDRET_RS10615Not AvailablePositive2412990 - 241421945960.2

Displaying genes 2111 – 2120 of 2547 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.