Desulfohalobium retbaense DSM 5692

Gram-negativeBacilliNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfohalobiaceae

Genus

Desulfohalobium

Description

Desulfohalobium retbaense (strain DSM 5692) is an anaerobic, moderately halophilic sulfate-reducing Gram-negative bacterium isolated from sediment of the pink hypersaline Lake Retba in Senegal, Africa. This organism incompletely oxidizes ethanol, pyruvate, and lactate to acetate and CO(2). Sulfate, sulfite, thiosulfate, and elemental sulfur are used as electron acceptors and reduced to H2S. Growth occurs at pH values ranging from 5.5 to 8.0, with an optimum pH between 6.5-7.0. The optimum temperature for growth is between 37 to 4O degrees Celsius, and 45 degrees Celsius is the upper temperature limit for growth. NaCl and MgCl(2), are required for growth, with an optimum NaCl concentration near 10%. (Adaptated from: http://ijs.sgmjournals.org/cgi/reprint/41/1/74.pdf). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfohalobiaceae
GenusDesulfohalobium
SpeciesDesulfohalobium retbaense
StrainDSM 5692

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Desulfohalobium retbaense DSM 5692
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature37
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Desulfohalobium retbaense DSM 5692, complete sequence.

Gene Summary

Adenine Count

609005 bp

Thymine Count

607177 bp

Guanine Count

823732 bp

Cytosine Count

824390 bp

Genome Length

2864304 bp

Protein-coding Genes

2437 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molybdopterin-binding proteinDRET_RS09045Not AvailablePositive2075008 - 207602436274.1
molybdopterin-dependent aldehyde oxidoreductaseDRET_RS09050Not AvailablePositive2076118 - 207883297724.4
pyridine nucleotide-disulfide oxidoreductase/dicluster-binding proteinDRET_RS09055Not AvailablePositive2079112 - 208141884800.8
dvu_1557 family redox proteinDRET_RS09060Not AvailablePositive2081418 - 20816337988.58
dvu_1556 family methyltransferaseDRET_RS13065Not AvailablePositive2081643 - 208235025271.5
dvu_1555 family c-gcaxxg-c-c proteinDRET_RS09070Not AvailablePositive2082358 - 208281615888.9
radical sam (seleno)protein trssDRET_RS09075Not AvailablePositive2082806 - 208413448651.9
dvu_1553 family amp-dependent coa ligaseDRET_RS09080Not AvailablePositive2084555 - 208592850159.3
xdhc family aldehyde oxidoreductase maturation factorDRET_RS09085Not AvailablePositive2085912 - 208694637104.2
dvu_1551 family ntp transferaseDRET_RS09090Not AvailablePositive2086947 - 208806540692.9

Displaying genes 1801 – 1810 of 2547 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.