Desulfohalobium retbaense DSM 5692

Gram-negativeBacilliNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfohalobiaceae

Genus

Desulfohalobium

Description

Desulfohalobium retbaense (strain DSM 5692) is an anaerobic, moderately halophilic sulfate-reducing Gram-negative bacterium isolated from sediment of the pink hypersaline Lake Retba in Senegal, Africa. This organism incompletely oxidizes ethanol, pyruvate, and lactate to acetate and CO(2). Sulfate, sulfite, thiosulfate, and elemental sulfur are used as electron acceptors and reduced to H2S. Growth occurs at pH values ranging from 5.5 to 8.0, with an optimum pH between 6.5-7.0. The optimum temperature for growth is between 37 to 4O degrees Celsius, and 45 degrees Celsius is the upper temperature limit for growth. NaCl and MgCl(2), are required for growth, with an optimum NaCl concentration near 10%. (Adaptated from: http://ijs.sgmjournals.org/cgi/reprint/41/1/74.pdf). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfohalobiaceae
GenusDesulfohalobium
SpeciesDesulfohalobium retbaense
StrainDSM 5692

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Desulfohalobium retbaense DSM 5692
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature37
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Desulfohalobium retbaense DSM 5692, complete sequence.

Gene Summary

Adenine Count

609005 bp

Thymine Count

607177 bp

Guanine Count

823732 bp

Cytosine Count

824390 bp

Genome Length

2864304 bp

Protein-coding Genes

2437 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mets family nss transporter small subunitDRET_RS13690Not AvailableNegative2032390 - 20324913507.58
sodium-dependent transporterDRET_RS08850Not AvailableNegative2032513 - 203399153870.6
chorismate mutaseDRET_RS08855Not AvailablePositive2034584 - 203617657868.6
hypothetical proteinDRET_RS13820Not AvailableNegative2036169 - 20363938528.46
pas domain-containing proteinDRET_RS08865Not AvailablePositive2036413 - 203785853607.6
aconitate hydrataseDRET_RS08870Not AvailablePositive2037864 - 203978968008.3
sura n-terminal domain-containing proteinDRET_RS08875Not AvailablePositive2040061 - 204194170729.6
dna polymerase ivDRET_RS08880Not AvailableNegative2042072 - 204326544084.6
metal-dependent hydrolaseDRET_RS08885Not AvailablePositive2043436 - 204415525742.8
type ii toxin-antitoxin system hipa family toxinDRET_RS08890Not AvailableNegative2044655 - 204586943760.6

Displaying genes 1761 – 1770 of 2547 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.