Desulfohalobium retbaense DSM 5692

Gram-negativeBacilliNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfohalobiaceae

Genus

Desulfohalobium

Description

Desulfohalobium retbaense (strain DSM 5692) is an anaerobic, moderately halophilic sulfate-reducing Gram-negative bacterium isolated from sediment of the pink hypersaline Lake Retba in Senegal, Africa. This organism incompletely oxidizes ethanol, pyruvate, and lactate to acetate and CO(2). Sulfate, sulfite, thiosulfate, and elemental sulfur are used as electron acceptors and reduced to H2S. Growth occurs at pH values ranging from 5.5 to 8.0, with an optimum pH between 6.5-7.0. The optimum temperature for growth is between 37 to 4O degrees Celsius, and 45 degrees Celsius is the upper temperature limit for growth. NaCl and MgCl(2), are required for growth, with an optimum NaCl concentration near 10%. (Adaptated from: http://ijs.sgmjournals.org/cgi/reprint/41/1/74.pdf). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfohalobiaceae
GenusDesulfohalobium
SpeciesDesulfohalobium retbaense
StrainDSM 5692

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Desulfohalobium retbaense DSM 5692
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature37
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Desulfohalobium retbaense DSM 5692, complete sequence.

Gene Summary

Adenine Count

609005 bp

Thymine Count

607177 bp

Guanine Count

823732 bp

Cytosine Count

824390 bp

Genome Length

2864304 bp

Protein-coding Genes

2437 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
paqr family membrane homeostasis protein trhaDRET_RS07870Not AvailablePositive1833562 - 183421824167.1
peptidoglycan-associated lipoprotein palDRET_RS07875Not AvailableNegative1834783 - 183538222269.9
pd40 domain-containing proteinDRET_RS07880Not AvailableNegative1835774 - 183708748344.7
tonb family proteinDRET_RS14015Not AvailableNegative1837094 - 183792429467.4
protein tolrDRET_RS07890Not AvailableNegative1837953 - 183836915284.8
mota/tolq/exbb proton channel family proteinDRET_RS07895Not AvailableNegative1838374 - 183910526618.2
histidinol phosphate phosphatase domain-containing proteinDRET_RS07900Not AvailableNegative1839282 - 183994423718.2
bifunctional nuclease family proteinDRET_RS07905Not AvailableNegative1839968 - 184046218658.5
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabDRET_RS07910Not AvailableNegative1840456 - 184179349967.5
adenylyl-sulfate kinaseDRET_RS07915Not AvailableNegative1841932 - 184254922940.3

Displaying genes 1571 – 1580 of 2547 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.