Geoalkalibacter subterraneus str. Red1

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Desulfuromonadales

Family

Geoalkalibacteraceae

Genus

Geoalkalibacter

Description

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderDesulfuromonadales
FamilyGeoalkalibacteraceae
GenusGeoalkalibacter
SpeciesGeoalkalibacter subterraneus
StrainRed1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geoalkalibacter subterraneus strain Red1 chromosome, complete

Gene Summary

Adenine Count

737596 bp

Thymine Count

755237 bp

Guanine Count

995516 bp

Cytosine Count

987174 bp

Genome Length

3475523 bp

Protein-coding Genes

3219 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfoGSUB_RS03450Not AvailableNegative759461 - 76081950108.3
type i dna topoisomeraseGSUB_RS03455Not AvailableNegative760823 - 76324690562.5
duf494 family proteinGSUB_RS03460Not AvailableNegative763333 - 76380318026.3
dna-processing protein dpraGSUB_RS03465Not AvailableNegative763848 - 76494839826.1
lysm peptidoglycan-binding domain-containing proteinGSUB_RS03470Not AvailableNegative765060 - 76609438100.5
tol-pal system protein ybgfGSUB_RS17860Not AvailableNegative766123 - 76681825799.9
peptidase u32 family proteinGSUB_RS03480Not AvailablePositive766986 - 76820945219.2
metallophosphoesterase family proteinGSUB_RS03485Not AvailableNegative768206 - 76888925735.6
hypothetical proteinGSUB_RS03490Not AvailableNegative768930 - 76952322676.4
fad-dependent oxidoreductaseGSUB_RS03495Not AvailablePositive769641 - 77099648292.5

Displaying genes 811 – 820 of 3629 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.