Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfuromonadia
Order
Desulfuromonadales
Family
Geoalkalibacteraceae
Genus
Geoalkalibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfuromonadia |
| Order | Desulfuromonadales |
| Family | Geoalkalibacteraceae |
| Genus | Geoalkalibacter |
| Species | Geoalkalibacter subterraneus |
| Strain | Red1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Geoalkalibacter subterraneus strain Red1 chromosome, complete
Gene Summary
Adenine Count
737596 bp
Thymine Count
755237 bp
Guanine Count
995516 bp
Cytosine Count
987174 bp
Genome Length
3475523 bp
Protein-coding Genes
3219 genes
Non-Coding Genes
133 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | GSUB_RS05415 | Not Available | Positive | 1204496 - 1204981 | 18725.0 |
| type vi secretion system baseplate subunit tsse | GSUB_RS05420 | Not Available | Positive | 1205070 - 1205486 | 15271.1 |
| type vi secretion system baseplate subunit tssf | GSUB_RS05425 | Not Available | Positive | 1205479 - 1207212 | 65862.7 |
| type vi secretion system baseplate subunit tssg | GSUB_RS05430 | Not Available | Positive | 1207176 - 1208141 | 34468.4 |
| type vi secretion system atpase tssh | GSUB_RS05435 | Not Available | Positive | 1208148 - 1210892 | 99352.8 |
| type vi secretion system vgr family protein | GSUB_RS05440 | Not Available | Positive | 1211079 - 1213142 | 75579.9 |
| hypothetical protein | GSUB_RS05445 | Not Available | Positive | 1213165 - 1213599 | 15477.5 |
| duf4150 domain-containing protein | GSUB_RS05450 | Not Available | Positive | 1213637 - 1214170 | 18222.8 |
| toxin vasx | GSUB_RS05455 | Not Available | Positive | 1214167 - 1217208 | 113162.0 |
| hypothetical protein | GSUB_RS05460 | Not Available | Positive | 1217208 - 1217963 | 29123.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.