Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfuromonadia
Order
Desulfuromonadales
Family
Geoalkalibacteraceae
Genus
Geoalkalibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfuromonadia |
| Order | Desulfuromonadales |
| Family | Geoalkalibacteraceae |
| Genus | Geoalkalibacter |
| Species | Geoalkalibacter subterraneus |
| Strain | Red1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Geoalkalibacter subterraneus strain Red1 chromosome, complete
Gene Summary
Adenine Count
737596 bp
Thymine Count
755237 bp
Guanine Count
995516 bp
Cytosine Count
987174 bp
Genome Length
3475523 bp
Protein-coding Genes
3219 genes
Non-Coding Genes
133 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | GSUB_RS04970 | Not Available | Positive | 1118530 - 1119414 | 31635.2 |
| type iv-a pilus assembly atpase pilb | GSUB_RS04975 | Not Available | Positive | 1119478 - 1121178 | 62992.6 |
| type iv pilus twitching motility protein pilt | GSUB_RS04980 | Not Available | Positive | 1121454 - 1122572 | 41494.6 |
| type ii secretion system f family protein | GSUB_RS04985 | Not Available | Positive | 1122603 - 1123820 | 43897.4 |
| two-component system sensor histidine kinase ntrb | GSUB_RS04990 | Not Available | Positive | 1123835 - 1125487 | 61031.1 |
| sigma-54-dependent transcriptional regulator | GSUB_RS04995 | Not Available | Positive | 1125534 - 1126931 | 52061.8 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | GSUB_RS05000 | Not Available | Positive | 1127302 - 1127571 | 10204.9 |
| type ii toxin-antitoxin system yafq family toxin | GSUB_RS05005 | Not Available | Positive | 1127573 - 1127848 | 10676.1 |
| putative toxin-antitoxin system toxin component, pin family | GSUB_RS05010 | Not Available | Negative | 1127894 - 1128319 | 15331.6 |
| fita-like ribbon-helix-helix domain-containing protein | GSUB_RS05015 | Not Available | Negative | 1128316 - 1128555 | 9046.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.