Phaeobacter italicus

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Phaeobacter

Description

Phaeobacter italicus is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and thrives optimally at a temperature of 25.0°C. This species is characterized by its unique morphological and physiological properties, aligning it with other members of the Phaeobacter genus known for their involvement in marine environments. The Gram-negative cell wall structure of P. italicus suggests a complex outer membrane that may play a role in its interactions with surrounding microorganisms and its environment. The aerobic nature of P. italicus indicates that it relies on oxygen for its metabolic processes, which can influence its ecological niche, particularly in oxygen-rich habitats. As a member of the diverse microbial community, P. italicus may engage in various biochemical interactions, potentially contributing to nutrient cycling in its habitat. Understanding the specific ecological roles of Phaeobacter italicus within its environment may provide insights into the dynamics of marine microbial communities. Its adaptability to optimal growth conditions at 25.0°C could also signify its potential resilience to slight temperature fluctuations, enhancing its competitive edge in specific ecological settings. Overall, P. italicus exemplifies the intricate adaptations of marine bacteria that enable them to occupy specialized niches and participate in ecological functions essential for maintaining the health of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPhaeobacter
SpeciesPhaeobacter italicus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phaeobacter italicus

Accession NumberCVRL00000000.1

Gene Summary

Adenine Count

799699 bp

Thymine Count

825250 bp

Guanine Count

1245589 bp

Cytosine Count

1184650 bp

Genome Length

4055188 bp

Protein-coding Genes

3791 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Terminase large subunitNIT7321_00137Not Available+142266 - 14283220187.5
Portal proteinNIT7321_00138Q1RIH4+143094 - 14428742941.9
hypothetical proteinNIT7321_00139Not Available+144280 - 1444988290.19
Putative prohead proteaseNIT7321_00140P49860+144534 - 14515722545.7
Phage major capsid proteinNIT7321_00141Not Available+145233 - 14641742216.6
hypothetical proteinNIT7321_00142Not Available+146577 - 14719422249.1
bacteriophage head-tail adaptorNIT7321_00143Not Available+147196 - 14756413789.5
hypothetical proteinNIT7321_00144Not Available+147561 - 14796814119.8
Gene transfer aget (gta) orfg9-like phage major tail proteinNIT7321_00145Not Available+148070 - 14848314389.9
Not AvailableNot Available+148268 - 14836018.01

Displaying genes 1 – 10 of 3879 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

294 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 294 metabolites