Sphaerobacter thermophilus DSM 20745

Gram-positiveRodNon-motileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Thermomicrobiota

Class

Thermomicrobia

Order

Sphaerobacterales

Family

Sphaerobacteraceae

Genus

Sphaerobacter

Description

Sphaerobacter thermophilus (strain DSM 20745 / S 6022) an obligate aerobic, thermophilic Gram-positive bacterium isolated from aerobic thermophilic sewage sludge (Adaptated from PMID: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=21087). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumThermomicrobiota
ClassThermomicrobia
OrderSphaerobacterales
FamilySphaerobacteraceae
GenusSphaerobacter
SpeciesSphaerobacter thermophilus
StrainDSM 20745

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Sphaerobacter thermophilus DSM 20745
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperature45
Temperature rangeThermophilic
HabitatSludge
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Sphaerobacter thermophilus DSM 20745 chromosome 1, complete

Gene Summary

Adenine Count

435703 bp

Thymine Count

438610 bp

Guanine Count

936773 bp

Cytosine Count

929947 bp

Genome Length

2741033 bp

Protein-coding Genes

2428 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSTHE_RS18720Not AvailablePositive1131113 - 11312957094.28
helix-turn-helix domain-containing proteinSTHE_RS05125Not AvailablePositive1131382 - 113220629220.4
diacylglycerol kinase family proteinSTHE_RS05130Not AvailableNegative1132268 - 113317632498.5
vms1/ankzf1 family peptidyl-trna hydrolaseSTHE_RS05135Not AvailableNegative1133173 - 113433343830.3
yggt family proteinSTHE_RS05140Not AvailableNegative1134657 - 113498011452.2
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabcSTHE_RS05145Not AvailableNegative1135049 - 113626042586.3
duf2085 domain-containing proteinSTHE_RS05150Not AvailableNegative1136257 - 113686822433.6
dna-directed rna polymerase subunit betaSTHE_RS05155Not AvailablePositive1137386 - 1140865129301.0
dna-directed rna polymerase subunit beta'STHE_RS05160Not AvailablePositive1140897 - 1145327162468.0
30s ribosomal protein s12STHE_RS05165Not AvailablePositive1145541 - 114596615809.5

Displaying genes 1031 – 1040 of 3539 in total

Metabolites

213 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da

Displaying 1–10 of 213 metabolites

Health Effects

No health effects information available for this bacterium.