Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. LY4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140381 bp
Thymine Count
1126363 bp
Guanine Count
1677813 bp
Cytosine Count
1697653 bp
Genome Length
5642210 bp
Protein-coding Genes
5200 genes
Non-Coding Genes
173 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit i | L904_03715 | Not Available | Positive | 747969 - 749675 | 62528.7 |
| protoheme ix farnesyltransferase | L904_03720 | Not Available | Positive | 750062 - 751015 | 33924.3 |
| protoheme ix farnesyltransferase | L904_03725 | Not Available | Positive | 751015 - 751146 | 4680.98 |
| cytochrome c oxidase assembly protein | L904_03730 | Not Available | Positive | 751176 - 751793 | 22506.0 |
| cytochrome b562 | L904_03735 | Not Available | Positive | 751855 - 752730 | 33171.3 |
| membrane protein | L904_03740 | Not Available | Positive | 753048 - 753434 | 13959.3 |
| cytochrome oxidase | L904_03745 | Not Available | Positive | 753486 - 754178 | 25125.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | L904_03750 | Not Available | Positive | 754256 - 755302 | 37601.9 |
| homoserine kinase | L904_03755 | Not Available | Positive | 755389 - 756363 | 36385.8 |
| rnaseh ribonuclease | L904_03760 | Not Available | Positive | 756360 - 756800 | 16307.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
