Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinL904_19610Not AvailableNegative1689348 - 168995922392.0
hypothetical proteinL904_19615Not AvailableNegative1689944 - 169035415143.1
hypothetical proteinL904_19620Not AvailableNegative1690354 - 169067111322.1
Putative major capsid proteinL904_19625Not AvailableNegative1690753 - 169185040785.0
Putative head decorative proteinL904_19630Not AvailableNegative1691863 - 169229414904.4
Prohead protease clppL904_19635Not AvailableNegative1692301 - 169359645969.5
Portal proteinL904_19640Not AvailableNegative1693593 - 169528462341.8
Head-to-tail joining proteinL904_19645Not AvailableNegative1695281 - 16955088491.23
Terminase large subunitL904_19650Not AvailableNegative1695771 - 169795481968.2
Putative terminase small subunitL904_19655Not AvailableNegative1697951 - 169855322937.6

Displaying genes 71 – 80 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.