Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine/putrescine abc transporter permeaseL904_02860Not AvailableNegative564294 - 56519932548.8
spermidine/putrescine abc transporter atpaseL904_02865Not AvailableNegative565202 - 56631140240.6
spermidine/putrescine abc transporter substrate-binding proteinL904_02870Not AvailableNegative566384 - 56752341843.8
3-ketoacyl-acp reductaseL904_02875Not AvailablePositive567818 - 56858826094.4
hypothetical proteinL904_02880Not AvailableNegative568647 - 56997847169.2
hypothetical proteinL904_02885Not AvailableNegative569989 - 57097236707.4
allophanate hydrolaseL904_02890Not AvailableNegative571271 - 57309764182.8
urea carboxylaseL904_02895Not AvailableNegative573097 - 576633126382.0
urea carboxylaseL904_02900Not AvailableNegative576638 - 57728823618.7
urea carboxylaseL904_02905Not AvailableNegative577305 - 57812030085.7

Displaying genes 771 – 780 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.