Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. LY4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140381 bp
Thymine Count
1126363 bp
Guanine Count
1677813 bp
Cytosine Count
1697653 bp
Genome Length
5642210 bp
Protein-coding Genes
5200 genes
Non-Coding Genes
173 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction dna helicase ruvb | L904_15895 | Not Available | Negative | 5589833 - 5590873 | 38157.3 |
| holliday junction dna helicase ruva | L904_15900 | Not Available | Negative | 5590999 - 5591616 | 21308.8 |
| holliday junction resolvase | L904_15905 | Not Available | Negative | 5591649 - 5592161 | 18143.2 |
| methyl-accepting chemotaxis protein | L904_15910 | Not Available | Positive | 5592409 - 5594718 | 81972.1 |
| alkane 1-monooxygenase | L904_15915 | Not Available | Positive | 5594849 - 5595850 | 36644.0 |
| transcriptional regulator | L904_15920 | Not Available | Negative | 5595898 - 5596644 | 26851.5 |
| general stress protein | L904_15925 | Not Available | Positive | 5596728 - 5597342 | 23122.3 |
| zn-dependent hydrolase | L904_15930 | Not Available | Negative | 5597381 - 5598223 | 30586.1 |
| metallophosphoesterase | L904_15935 | Not Available | Negative | 5598337 - 5599161 | 29632.3 |
| 5-formyltetrahydrofolate cyclo-ligase | L904_15940 | Not Available | Negative | 5599232 - 5599849 | 21990.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
