Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dimethylglycine dehydrogenaseL904_15210Not AvailablePositive5460987 - 546350092424.1
chemotaxis protein cheyL904_15215Not AvailablePositive5463687 - 546449630210.4
phospholipaseL904_15220Not AvailableNegative5464513 - 546606958124.2
arsr family transcriptional regulatorL904_15225Not AvailablePositive5466229 - 546654311775.2
hypothetical proteinL904_15230Not AvailablePositive5466540 - 546689613234.6
atp-dependent clp protease proteolytic subunitL904_15235Not AvailablePositive5467022 - 546754619462.6
nad-dependent epimeraseL904_15240Not AvailableNegative5467557 - 546844732070.2
dna topoisomerase iv subunit bL904_15245Not AvailableNegative5468515 - 547062977378.1
phospholipaseL904_15250Not AvailablePositive5470909 - 547173629589.2
triosephosphate isomeraseL904_15255Not AvailablePositive5471949 - 547271927084.3

Displaying genes 5241 – 5250 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.