Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. LY4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140381 bp
Thymine Count
1126363 bp
Guanine Count
1677813 bp
Cytosine Count
1697653 bp
Genome Length
5642210 bp
Protein-coding Genes
5200 genes
Non-Coding Genes
173 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylmethionine trna ribosyltransferase | L904_14945 | Not Available | Positive | 5412031 - 5413113 | 40066.6 |
| queuine trna-ribosyltransferase | L904_14950 | Not Available | Positive | 5413113 - 5414243 | 41913.9 |
| aminodeoxychorismate synthase | L904_14955 | Not Available | Positive | 5414281 - 5415438 | 42649.0 |
| diaminopimelate decarboxylase | L904_14960 | Not Available | Negative | 5415644 - 5416921 | 44539.9 |
| amp-dependent synthetase | L904_14965 | Not Available | Negative | 5416905 - 5418437 | 55127.4 |
| acyl carrier protein | L904_14970 | Not Available | Negative | 5418434 - 5418697 | 9669.63 |
| hypothetical protein | L904_14975 | Not Available | Negative | 5418803 - 5419543 | 27261.3 |
| alcohol dehydrogenase | L904_14995 | Not Available | Negative | 5419806 - 5420925 | 39758.1 |
| hypothetical protein | L904_15000 | Not Available | Negative | 5421193 - 5421339 | 5492.95 |
| hypothetical protein | L904_15005 | Not Available | Positive | 5421354 - 5422568 | 45687.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
