Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. LY4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140381 bp
Thymine Count
1126363 bp
Guanine Count
1677813 bp
Cytosine Count
1697653 bp
Genome Length
5642210 bp
Protein-coding Genes
5200 genes
Non-Coding Genes
173 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | L904_01555 | Not Available | Negative | 305859 - 307055 | 42577.4 |
| 2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferase | L904_01560 | Not Available | Negative | 307071 - 307925 | 30455.4 |
| lysine decarboxylase | L904_01565 | Not Available | Positive | 308043 - 308930 | 33305.1 |
| methyl-accepting chemotaxis protein | L904_01570 | Not Available | Positive | 309082 - 311430 | 82425.3 |
| hypothetical protein | L904_01575 | Not Available | Negative | 311501 - 312445 | 34586.1 |
| heat shock protein hsp20 | L904_01580 | Not Available | Positive | 312652 - 313077 | 15985.3 |
| hypothetical protein | L904_01585 | Not Available | Positive | 313134 - 313391 | 9452.16 |
| hypothetical protein | L904_01590 | Not Available | Negative | 313433 - 314050 | 22403.4 |
| had family hydrolase | L904_01595 | Not Available | Negative | 314151 - 314864 | 26278.4 |
| membrane protein | L904_01600 | Not Available | Positive | 314971 - 315888 | 32711.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
