Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. LY4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140381 bp
Thymine Count
1126363 bp
Guanine Count
1677813 bp
Cytosine Count
1697653 bp
Genome Length
5642210 bp
Protein-coding Genes
5200 genes
Non-Coding Genes
173 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose abc transporter substrate-binding protein | L904_14165 | Not Available | Negative | 5260253 - 5261293 | 36188.0 |
| transcriptional regulator | L904_14170 | Not Available | Positive | 5261536 - 5262768 | 43532.6 |
| glycerol-3-phosphate dehydrogenase | L904_14175 | Not Available | Negative | 5262788 - 5264332 | 56965.0 |
| methylmalonyl-coa epimerase | L904_14180 | Not Available | Negative | 5264505 - 5264921 | 14890.9 |
| methylmalonyl-coa mutase | L904_14185 | Not Available | Negative | 5264935 - 5267076 | 77327.5 |
| acetyl-coa carboxylase | L904_14190 | Not Available | Negative | 5267210 - 5269213 | 71847.2 |
| hypothetical protein | L904_14195 | Not Available | Negative | 5269218 - 5269619 | 14451.0 |
| hypothetical protein | L904_14200 | Not Available | Negative | 5269660 - 5270037 | 14365.2 |
| glutathione s-transferase | L904_14205 | Not Available | Negative | 5270141 - 5271037 | 32854.9 |
| methylmalonyl-coa carboxyltransferase | L904_14210 | Not Available | Negative | 5271130 - 5272662 | 55777.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
