Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. LY4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140381 bp
Thymine Count
1126363 bp
Guanine Count
1677813 bp
Cytosine Count
1697653 bp
Genome Length
5642210 bp
Protein-coding Genes
5200 genes
Non-Coding Genes
173 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | L904_13765 | Not Available | Positive | 5174152 - 5174991 | 29798.0 |
| sugar isomerase | L904_13770 | Not Available | Negative | 5175180 - 5176535 | 49340.0 |
| short-chain dehydrogenase | L904_13775 | Not Available | Negative | 5176624 - 5178720 | 75981.6 |
| deor faimly transcriptional regulator | L904_13780 | Not Available | Positive | 5178921 - 5179751 | 30151.2 |
| abc transporter substrate-binding protein | L904_13785 | Not Available | Positive | 5179799 - 5180809 | 34882.9 |
| sugar abc transporter | L904_13790 | Not Available | Positive | 5181033 - 5182568 | 55522.4 |
| branched-chain amino acid abc transporter permease | L904_13795 | Not Available | Positive | 5182561 - 5183583 | 35342.2 |
| branched-chain amino acid abc transporter permease | L904_13800 | Not Available | Positive | 5183580 - 5184590 | 35403.7 |
| l-rhamnose mutarotase | L904_13805 | Not Available | Positive | 5184594 - 5184917 | 12283.9 |
| carbohydrate kinase | L904_13810 | Not Available | Positive | 5184914 - 5186296 | 49147.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
