Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxoisovalerate dehydrogenase subunit alphaL904_13715Not AvailableNegative5162332 - 516357045489.2
acyl-coa dehydrogenaseL904_13720Not AvailableNegative5163615 - 516474240479.4
acetyl-coa acetyltransferaseL904_13725Not AvailableNegative5164755 - 516591839867.8
arsr family transcriptional regulatorL904_13730Not AvailablePositive5166102 - 516657517610.1
isovaleryl-coa dehydrogenaseL904_13735Not AvailablePositive5166656 - 516782842152.6
methylcrotonoyl-coa carboxylaseL904_13740Not AvailablePositive5167838 - 516943958062.6
3-methylcrotonyl-coa carboxylase subunit alphaL904_13745Not AvailablePositive5169447 - 517143870909.6
hydroxymethylglutaryl-coa lyaseL904_13750Not AvailablePositive5171440 - 517236631987.4
enoyl-coa hydrataseL904_13755Not AvailablePositive5172356 - 517312627028.8
pantoate--beta-alanine ligaseL904_13760Not AvailablePositive5173277 - 517415531664.0

Displaying genes 4951 – 4960 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.