Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinL904_13615Not AvailablePositive5144775 - 514637359257.9
hypothetical proteinL904_13620Not AvailableNegative5146606 - 51467946771.5
abc transporter atp-binding proteinL904_13625Not AvailableNegative5146781 - 514753927931.0
peptide abc transporter atp-binding proteinL904_13630Not AvailableNegative5147539 - 514837530998.0
cytochrome c550L904_13635Not AvailableNegative5148380 - 514926731665.7
abc transporter permeaseL904_13640Not AvailableNegative5149267 - 515028937760.7
amino acid transporterL904_13645Not AvailablePositive5150540 - 515124124661.6
gntr family transcriptional regulatorL904_13650Not AvailableNegative5151269 - 515200026567.8
arac family transcriptional regulatorL904_13655Not AvailableNegative5152097 - 515313738223.9
alpha/beta hydrolaseL904_13660Not AvailablePositive5153214 - 515404130757.3

Displaying genes 4931 – 4940 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.