Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-haloalkanoic acid dehalogenaseL904_13360Not AvailablePositive5089325 - 509003826235.8
abc transporter permeaseL904_13365Not AvailablePositive5091833 - 509278334047.3
dna-directed rna polymerase subunit alphaL904_13370Not AvailablePositive5092783 - 509363430128.3
abc transporterL904_13375Not AvailablePositive5093634 - 509528959862.4
asnc family transcriptional regulatorL904_13380Not AvailableNegative5095508 - 509598418045.3
d-amino acid oxidaseL904_13385Not AvailablePositive5096215 - 509754047067.2
sarcosine oxidase subunit betaL904_13390Not AvailableNegative5097548 - 509869941344.8
(2fe-2s)-binding proteinL904_13395Not AvailableNegative5098692 - 510007449040.3
nad(fad)-dependent dehydrogenaseL904_13400Not AvailableNegative5100053 - 510036411335.9
lysr family transcriptional regulatorL904_13405Not AvailablePositive5100478 - 510140133757.3

Displaying genes 4881 – 4890 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.