Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
calcium-binding proteinL904_13210Not AvailablePositive5053308 - 505419532254.3
hemolysin secretion protein dL904_13215Not AvailableNegative5054220 - 505553347991.5
type i secretion proteinL904_13220Not AvailableNegative5055520 - 505736765791.1
heme transporter ccmcL904_13225Not AvailableNegative5058241 - 5061090102187.0
histidine kinaseL904_13230Not AvailableNegative5061240 - 506220535496.4
rna polymerase sigma70L904_13235Not AvailableNegative5062347 - 506284719030.8
ferrichrome abc transporterL904_13240Not AvailableNegative5063036 - 506378826690.7
iron-siderophore abc transporter permeaseL904_13245Not AvailableNegative5063782 - 506484937373.0
abc transporter substrate-binding proteinL904_13250Not AvailableNegative5064846 - 506598542319.6
abc transporter substrate-binding proteinL904_13255Not AvailableNegative5066082 - 506721541707.1

Displaying genes 4851 – 4860 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.