Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. LY4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140381 bp
Thymine Count
1126363 bp
Guanine Count
1677813 bp
Cytosine Count
1697653 bp
Genome Length
5642210 bp
Protein-coding Genes
5200 genes
Non-Coding Genes
173 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-heme chloroperoxidase cpo | L904_12530 | Not Available | Negative | 4889914 - 4890606 | 25398.2 |
| dioxygenase | L904_12535 | Not Available | Negative | 4890750 - 4891682 | 34046.1 |
| membrane protein | L904_12540 | Not Available | Negative | 4892818 - 4893897 | 39445.7 |
| mfs transporter | L904_12545 | Not Available | Negative | 4893921 - 4894385 | 17586.4 |
| transcriptional regulator | L904_12550 | Not Available | Negative | 4894382 - 4895569 | 41836.8 |
| lysr family transcriptional regulator | L904_12555 | Not Available | Positive | 4895657 - 4896589 | 34895.7 |
| hypothetical protein | L904_12560 | Not Available | Negative | 4897126 - 4897239 | 4327.42 |
| ice nucleation-like protein | L904_12565 | Not Available | Positive | 4897347 - 4900289 | 97024.9 |
| hypothetical protein | L904_12570 | Not Available | Positive | 4900383 - 4901348 | 36810.8 |
| glycosyl transferase | L904_12575 | Not Available | Positive | 4901652 - 4903613 | 72963.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
