Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
recombinase recxL904_12230Not AvailablePositive4828201 - 482879121891.2
cytochrome cL904_12235Not AvailableNegative4828795 - 482919314213.0
hypothetical proteinL904_12240Not AvailableNegative4829289 - 482981617795.4
iron-hydroxamate transporter atp-binding proteinL904_12245Not AvailableNegative4830065 - 483087429159.5
abc transporter permeaseL904_12250Not AvailableNegative4830909 - 483287366891.1
amino acid abc transporter substrate-binding proteinL904_12255Not AvailableNegative4832870 - 483377232254.3
ligand-gated channelL904_12260Not AvailableNegative4833801 - 483594878219.5
lysr family transcriptional regulatorL904_12265Not AvailablePositive4836085 - 483703234482.0
hypothetical proteinL904_12270Not AvailablePositive4837277 - 48375409075.8
sulfataseL904_12275Not AvailablePositive4837728 - 483939560952.3

Displaying genes 4661 – 4670 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.