Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutathione synthetaseL904_01255Not AvailablePositive244382 - 24534136127.4
atpase aaaL904_01260Not AvailablePositive245527 - 24705953363.0
cysteine synthaseL904_01265Not AvailableNegative247277 - 24824533640.8
lysine transporter lyseL904_01270Not AvailableNegative248386 - 24900321934.0
deoxyuridine 5'-triphosphate nucleotidohydrolaseL904_01275Not AvailableNegative249091 - 24956116505.9
peptide chain release factor 3L904_01280Not AvailablePositive249652 - 25123558902.8
phosphopantothenate synthaseL904_01285Not AvailablePositive251407 - 25261242604.7
hypothetical proteinL904_01290Not AvailablePositive252609 - 25298314195.0
sterol desaturaseL904_01295Not AvailableNegative252993 - 25390733998.4
2-polyprenylphenol 6-hydroxylaseL904_01300Not AvailableNegative254073 - 25563857860.4

Displaying genes 451 – 460 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.