Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorL904_11340Not AvailableNegative4631348 - 463208827881.5
hypothetical proteinL904_11345Not AvailableNegative4632269 - 46324336378.53
phosphoenolpyruvate carboxykinaseL904_11350Not AvailablePositive4632413 - 463402358015.8
peptide chain release factor iL904_11355Not AvailablePositive4634136 - 463457015840.1
peptidoglycan-binding protein lysmL904_11360Not AvailablePositive4634657 - 463510616016.3
pantothenate kinaseL904_11365Not AvailableNegative4635150 - 463615138020.5
phosphoribosyl-atp pyrophosphataseL904_11370Not AvailableNegative4636148 - 463648612001.3
imidazole glycerol phosphate synthaseL904_11375Not AvailableNegative4636487 - 463726327292.6
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomeraseL904_11380Not AvailableNegative4637260 - 463800325969.3
imidazole glycerol phosphate synthaseL904_11385Not AvailableNegative4638005 - 463865523175.8

Displaying genes 4481 – 4490 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.