Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna gyrase subunit bL904_11240Not AvailablePositive4602946 - 460538188765.9
nad(p)h-flavin oxidoreductaseL904_11245Not AvailableNegative4605487 - 460608922429.3
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseL904_11250Not AvailablePositive4606218 - 460706029732.7
esteraseL904_11255Not AvailablePositive4607143 - 460841747287.7
zinc metallopeptidaseL904_11260Not AvailablePositive4608487 - 460925428591.8
n-(5'-phosphoribosyl)anthranilate isomeraseL904_11265Not AvailablePositive4609306 - 461001925283.3
tryptophan synthase subunit betaL904_11270Not AvailablePositive4610021 - 461124143756.4
tryptophan synthase subunit alphaL904_11275Not AvailablePositive4611234 - 461208529764.2
acetyl-coa carboxylase subunit betaL904_11280Not AvailablePositive4612113 - 461300932784.1
folylpolyglutamate synthaseL904_11285Not AvailablePositive4613132 - 461447548022.9

Displaying genes 4461 – 4470 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.