Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. LY4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140381 bp
Thymine Count
1126363 bp
Guanine Count
1677813 bp
Cytosine Count
1697653 bp
Genome Length
5642210 bp
Protein-coding Genes
5200 genes
Non-Coding Genes
173 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine abc transporter atp-binding protein | L904_10585 | Not Available | Negative | 4450155 - 4450871 | 25674.9 |
| thiamine abc transporter permease | L904_10590 | Not Available | Negative | 4450868 - 4452493 | 57486.6 |
| thiamine abc transporter substrate-binding protein | L904_10595 | Not Available | Negative | 4452513 - 4453526 | 36991.3 |
| glyoxalase | L904_10600 | Not Available | Negative | 4453722 - 4454108 | 14376.0 |
| elongation factor 3 | L904_10605 | Not Available | Negative | 4454213 - 4456024 | 67255.1 |
| thiamine pyrophosphokinase | L904_10610 | Not Available | Negative | 4456044 - 4456697 | 22612.9 |
| homoserine o-succinyltransferase | L904_10615 | Not Available | Positive | 4456947 - 4457873 | 35735.6 |
| aldose 1-epimerase | L904_10620 | Not Available | Positive | 4458050 - 4459069 | 37532.1 |
| peptidoglycan transglycosylase | L904_10625 | Not Available | Negative | 4459085 - 4459831 | 27272.4 |
| geranylgeranyl pyrophosphate synthase | L904_10630 | Not Available | Positive | 4459933 - 4460883 | 33460.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
