Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sorbitol dehydrogenaseL904_23730Not AvailableNegative3104979 - 310574926790.3
sugar abc transporter substrate-binding proteinL904_23735Not AvailableNegative3106012 - 310732547841.7
sugar kinaseL904_23740Not AvailablePositive3107656 - 310864534396.9
tagatose-bisphosphate aldolaseL904_23745Not AvailablePositive3108642 - 310991945705.4
hypothetical proteinL904_23765Not AvailableNegative3110093 - 31102696251.66
hypothetical proteinL904_23770Not AvailableNegative3110315 - 311109128483.3
heme utilization protein huvxL904_23775Not AvailableNegative3111272 - 311179618780.3
antibiotic biosynthesis monooxygenaseL904_23780Not AvailableNegative3111806 - 311215313341.7
hemin abc transporter substrate-binding proteinL904_23785Not AvailablePositive3112296 - 311323431888.5
heme abc transporter permeaseL904_23790Not AvailablePositive3113231 - 311431936622.9

Displaying genes 3111 – 3120 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.