Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
biopolymer transporter tonbL904_00500Not AvailablePositive105186 - 10611233103.1
sulfolactate dehydrogenaseL904_00505Not AvailablePositive106263 - 10725234327.5
transcriptional regulatorL904_00510Not AvailableNegative107470 - 1077159069.85
arac family transcriptional regulatorL904_00515Not AvailableNegative108180 - 10922038616.3
ribose 1,5-bisphosphate phosphokinaseL904_00520Not AvailableNegative109308 - 10990721523.3
phosphonate metabolism protein phnmL904_00525Not AvailableNegative109904 - 11104041328.9
phosphonate metabolism proteinL904_00530Not AvailableNegative111037 - 11173526523.0
hypothetical proteinL904_00535Not AvailablePositive111836 - 1120096319.58
phosphonate abc transporter permeaseL904_00540Not AvailableNegative112006 - 11335550364.7
phosphonate abc transporter permeaseL904_00545Not AvailableNegative113355 - 11434136164.4

Displaying genes 301 – 310 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.