Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter atp-binding proteinL904_23580Not AvailableNegative3073854 - 307495439633.4
sugar abc transporter permeaseL904_23585Not AvailableNegative3074957 - 307584132814.7
sugar abc transporter permeaseL904_23590Not AvailableNegative3075846 - 307672733123.0
arac family transcriptional regulatorL904_23595Not AvailablePositive3076940 - 307786635123.3
amidohydrolaseL904_23600Not AvailableNegative3077908 - 307878632042.3
mandelate racemaseL904_23605Not AvailableNegative3078783 - 307991941304.5
5-dehydro-4-deoxyglucarate dehydrataseL904_23610Not AvailableNegative3079956 - 308086732476.1
2-deoxy-d-gluconate 3-dehydrogenaseL904_23615Not AvailableNegative3080982 - 308172525733.7
5-keto-4-deoxyuronate isomeraseL904_23620Not AvailableNegative3081722 - 308254630406.2
nad-dependent dehydrataseL904_23625Not AvailablePositive3082685 - 308348229176.7

Displaying genes 3081 – 3090 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.