Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
replication protein bL904_22815Not AvailableNegative2920240 - 292123536347.8
chromosome partitioning protein paraL904_22820Not AvailableNegative2921320 - 292251044565.8
autoinducer synthaseL904_22825Not AvailablePositive2922888 - 292352622927.4
conjugal transfer protein trbbL904_22830Not AvailablePositive2923523 - 292449434877.0
conjugal transfer protein trbcL904_22835Not AvailablePositive2924484 - 292489413585.6
conjugal transfer protein trbdL904_22840Not AvailablePositive2924887 - 292518611368.4
conjugal transfer protein trbjL904_22845Not AvailablePositive2927733 - 292844026163.6
conjugal transfer protein trblL904_22850Not AvailablePositive2928694 - 292984838851.9
conjugal transfer protein trbfL904_22855Not AvailablePositive2929863 - 293052524714.2
conjugal transfer protein trbgL904_22860Not AvailablePositive2930576 - 293139428825.6

Displaying genes 2931 – 2940 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.