Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
deoxyribose-phosphate aldolaseL904_00350Not AvailablePositive72590 - 7336327300.9
thymidine phosphorylaseL904_00355Not AvailablePositive73360 - 7467645629.4
aspartyl proteaseL904_00360Not AvailableNegative74669 - 7519018592.7
uracil phosphoribosyltransferaseL904_00365Not AvailableNegative75325 - 7595423218.3
adenosine deaminaseL904_00370Not AvailableNegative76050 - 7702735043.4
phosphopentomutaseL904_00375Not AvailableNegative77024 - 7824443528.7
hypothetical proteinL904_00380Not AvailableNegative78358 - 7911928011.5
cytochrome o ubiquinol oxidaseL904_00385Not AvailableNegative79397 - 7979214743.3
cytochrome o ubiquinol oxidaseL904_00390Not AvailableNegative79792 - 8041823034.4
cytochrome o ubiquinol oxidaseL904_00395Not AvailableNegative80425 - 8242874374.1

Displaying genes 271 – 280 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.