Agrobacterium sp. LY4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. LY4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. LY4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. LY4 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1140381 bp

Thymine Count

1126363 bp

Guanine Count

1677813 bp

Cytosine Count

1697653 bp

Genome Length

5642210 bp

Protein-coding Genes

5200 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polar amino acid abc transporter permeaseL904_05940Not AvailableNegative2487777 - 248844824577.7
amino acid abc transporter substrate-binding proteinL904_05945Not AvailableNegative2488531 - 248931627612.2
gntr family transcriptional regulatorL904_05950Not AvailableNegative2489323 - 249003326316.4
lipid-a-disaccharide synthaseL904_05955Not AvailableNegative2490197 - 249138143281.6
hypothetical proteinL904_05960Not AvailableNegative2491378 - 249224430015.8
udp-n-acetylglucosamine acyltransferaseL904_05965Not AvailableNegative2492248 - 249306328392.0
3-hydroxyacyl-acp dehydrataseL904_05970Not AvailableNegative2493060 - 249352717075.8
udp-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferaseL904_05975Not AvailableNegative2493520 - 249458737029.7
outer membrane protein assembly factor yaetL904_05980Not AvailableNegative2494637 - 249696184215.9
zinc metalloproteaseL904_05985Not AvailableNegative2497161 - 249828239793.7

Displaying genes 2511 – 2520 of 5373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.