Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. LY4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140381 bp
Thymine Count
1126363 bp
Guanine Count
1677813 bp
Cytosine Count
1697653 bp
Genome Length
5642210 bp
Protein-coding Genes
5200 genes
Non-Coding Genes
173 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyketide cyclase | L904_05240 | Not Available | Negative | 2345532 - 2345936 | 14565.2 |
| hypothetical protein | L904_05245 | Not Available | Positive | 2346055 - 2347638 | 59160.1 |
| cation transporter | L904_05250 | Not Available | Positive | 2347635 - 2348135 | 18361.2 |
| nitrogen fixation protein fixi | L904_05255 | Not Available | Positive | 2348210 - 2350423 | 77823.9 |
| cytochrome oxidase maturation protein cbb3 | L904_05260 | Not Available | Positive | 2350420 - 2350578 | 5892.11 |
| 6-phosphogluconate dehydrogenase | L904_05265 | Not Available | Positive | 2350743 - 2352173 | 51152.5 |
| membrane protein | L904_05270 | Not Available | Negative | 2352240 - 2352566 | 12599.4 |
| l-glyceraldehyde 3-phosphate reductase | L904_05275 | Not Available | Negative | 2352757 - 2353788 | 38108.3 |
| beta-mannosidase | L904_05280 | Not Available | Negative | 2353892 - 2356375 | 93537.1 |
| laci family transcriptional regulator | L904_05285 | Not Available | Positive | 2356882 - 2357934 | 38523.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
